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java.lang.Object O2Plib.db.CSD.CSDglb O2Plib.db.CSD.CSDannotation
public class CSDannotation
Class CSDannotation defines protein/peptide spot identification and annotation for an Rspot set in the Composite Samples Database (CSD).
This file is derived from Open2Dprot, MAExplorer and GELLAB-II code.
This work was produced by Peter Lemkin of the National Cancer Institute, an agency of the United States Government. As a work of the United States Government there is no associated copyright. It is offered as open source software under the Mozilla Public License (version 1.1) subject to the limitations noted in the accompanying LEGAL file. This notice must be included with the code. The Open2Dprot Mozilla and Legal files are available on http://Open2Dprot.sourceforge.net/.
Field Summary | |
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int |
nbr
Annotation ID number |
java.lang.String |
spID
Swiss-Prot ID |
java.lang.String |
spName
Swiss-Prot Name |
java.lang.String |
uniprotID
UniProt ID |
static java.lang.String |
VERSION
Version for this module |
Constructor Summary | |
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CSDannotation()
CSDannotation() - Constructor for new CSDannotation. |
Method Summary | |
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void |
clear()
clear() - clear instance. |
static java.lang.String |
getTabDelimitedFields()
getTabDelimitedFields() - get a string representation of the tab-delimited data fields |
java.lang.String |
toString()
toString() - get a pretty-print string representation of this instance |
java.lang.String |
toTabDelimitedData()
toTabDelimitedData() - get a string representation of this instance as tab-delimited data values |
java.lang.String |
toXML()
toXML() - get a string representation of this instance as XML |
Methods inherited from class O2Plib.db.CSD.CSDglb |
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initGlb |
Methods inherited from class java.lang.Object |
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clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait |
Field Detail |
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public static final java.lang.String VERSION
public int nbr
public java.lang.String uniprotID
public java.lang.String spID
public java.lang.String spName
Constructor Detail |
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public CSDannotation()
Method Detail |
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public void clear()
public java.lang.String toString()
toString
in class java.lang.Object
public static java.lang.String getTabDelimitedFields()
public java.lang.String toTabDelimitedData()
public java.lang.String toXML()
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