Uses of Class
O2Plib.db.CSD.CSDRspot

Packages that use CSDRspot
O2Plib.db.CSD   
 

Uses of CSDRspot in O2Plib.db.CSD
 

Fields in O2Plib.db.CSD declared as CSDRspot
 CSDRspot CSDRspot.nextRspot
          Next instance for list of Rspots linked list
 CSDRspot[] CSDnorm.ratioMeanSpots
          [0:nRatioMeanSpots-1] list of spots used in ratio mean normalization
 CSDRspot[] CSDRmap.rspotNbr2Rspot
          [0:nRmapSize-1] map of a number Rspot id number to the Rspot set object.
 CSDRspot[] CSDRspotList.rspotsList
          [0:totRspots-1] list of Rspot objects
static CSDRspot CSDglb.wrkERspot
          Working Rspot related data.
 

Methods in O2Plib.db.CSD that return CSDRspot
 CSDRspot CSDRspotList.addRspotToHashtable(CSDRspot r)
          addRspotToHashtable() - Add Rspot to Rspot list hashtable.
 CSDRspot CSDRspotList.addRspotToHashtableDbug(CSDRspot r, int pSpotNbr)
          addRspotToHashtableDbug() - DBUG version.
 CSDRspot CSDRspot.cloneIt()
          cloneIt() - clone the contents of this Rspot.
 CSDRspot[] CSDRspotList.getRspotsList()
          getRspotsList() - get the list of Rspot CSDRspot objects
 CSDRspot CSDRspotList.lookupRspotByExactRspotXYcoord(float x, float y)
          lookupRspotByExactRspotXYcoord() - lookup Rspot set by exact Rspot set (xRspot,yRspot) coordinates.
 CSDRspot CSDRspotList.lookupRspotByExactRspotXYcoordDbug(float x, float y, int lmSetRsample, int pSpotNbr)
          lookupRspotByExactRspotXYcoordDbug() - DBUG version.
 CSDRspot CSDRspotList.lookupRspotByNearestERspotXYcoord(float x, float y, float minAcceptableDist)
          lookupRspotByNearestERspotXYcoord() - lookup nearest ERspot set by (xERspot,yERspot) coordinates.
 CSDRspot CSDRspotList.lookupRspotByNearestRspotXYcoord(float x, float y, float minAcceptableDist)
          lookupRspotByNearestRspotXYcoord() - lookup nearest Rspot set by (xRspot,yRspot) coordinates.
 CSDRspot CSDRspotList.lookupRspotByNearestRspotXYcoord(float x, float y, float minAcceptableDist, boolean onlyERspotsFlag)
          lookupRspotByNearestRspotXYcoord() - lookup nearest Rspot set by (xRspot,yRspot) coordinates.
 CSDRspot CSDRspotList.lookupRspotByNearestRspotXYcoord(int x, int y, float minAcceptableDist)
          lookupRspotByNearestRspotXYcoord() - lookup nearest Rspot set by (xRspot,yRspot) coordinates.
 CSDRspot CSDRspotList.lookupRspotByRspotIDnbr(int rNbr)
          lookupRspotByRspotIDnbr() - lookup Rspot set by ID number
 CSDRspot CSDRspotList.rmvFromHashtable(CSDRspot r)
          rmvFromHashtable() - Remove Rspot from Rspot set hashtable.
 

Methods in O2Plib.db.CSD with parameters of type CSDRspot
 boolean CSDRspotList.add(CSDRspot dbR)
          add() - add Rspot to RSL.
 boolean CSDRspotList.add(CSDRspot dbR, int rNbr)
          add() - add Rspot to RSL.
 boolean CSDRmap.add(int rspotNbr, CSDRspot rSpot, java.lang.String fSpotName)
          add() - add entry to the Rmap
 boolean CSDRspotList.addDbug(CSDRspot dbR, int rNbr, int pSpotNbr)
          addDbug() - DBUG version.
 CSDRspot CSDRspotList.addRspotToHashtable(CSDRspot r)
          addRspotToHashtable() - Add Rspot to Rspot list hashtable.
 CSDRspot CSDRspotList.addRspotToHashtableDbug(CSDRspot r, int pSpotNbr)
          addRspotToHashtableDbug() - DBUG version.
 boolean CSDfilterState.chkPairingBits(CSDRspot r)
          chkPairingBits() - test the pairing bits agains the Rspot.
 boolean CSDlimits.chkRspotLimits(CSDRspot rSpot)
          chkRspotLimits() - check if all DbPspots in the Rspot set meet the Sample values for MW, pIe, area, density (D'), density range, dP and dL limits.
 void CSDRspot.copy(CSDRspot r)
          copy() - copy the contents of Rspot r to this Rspot.
 int CSDRspotList.lookupIdxByRspot(CSDRspot dbR)
          lookupIdxByRspot() - lookup index of Rspot object in RSL.
 float CSDnorm.normalizeData(CSDRspot rspot, float data, int idxSample)
          normalizeData() - normalize data by this normalization.
 boolean CSDRmap.remove(CSDRspot rSpot)
          remove() - remove entry to the Rmap [TODO]
 boolean CSDRspotList.remove(CSDRspot dbR)
          remove() - remove Rspot from RSL.
 CSDRspot CSDRspotList.rmvFromHashtable(CSDRspot r)
          rmvFromHashtable() - Remove Rspot from Rspot set hashtable.
 boolean CSDnorm.set_ratio_list(CSDRspot[] rSpotList)
          set_ratio_list() - Get a list of Rspots which will serve as a basis to normalize spots in calculations and reporting for ratio-list normalization mode.
 boolean CSDRspotList.setRspotsList(CSDRspot[] rspotsListData)
          setRspotsList() - set the list of Rspot CSDRspot objects This makes a copy of the Rspots not of the rspotsListData array and assigned the rspotsNbrs[], sets up maxRspots, totRspots, nbrRspots, nbrERspots.