Uses of Class
Seg2Dgel.Sg2glb

Uses of Sg2glb in Seg2Dgel
 

Subclasses of Sg2glb in Seg2Dgel
 class Seg2Dgel
          The Seg2Dgel program is a 2D gel spot segmenter for the Open2Dprot project.
 class Sg2avg
          Class sg2avg computes pixel neighborhood average for the 2D Gel Spot Segmenter.
 class Sg2bkg
          Class Sg2bkg computes background density of the input gel image for the 2D gel spot segmenter.
 class Sg2cc
          Class Sg2cc computes the pixel neighborhood central core (CC) for the 2D Gel Spot Segmenter from the averaged image (pix4).
 class Sg2data
          Class sg2data splits large saturated or near saturated spots by Boundary, Run-Projection-Map (boundary) or Threshold methods for the 2D gel spot segmenter.
 class Sg2dbug
          Class Sg2dbug contains debug print methods for image neighbohood, windows, etc.
 class Sg2draw
          Class Sg2draw is used to draw overlay text, dots, plus and boundarys in segmented output images used by the Seg2Dgel.
 class Sg2fbl
          Class Sg2fbl specifies methods for manipulating the Final Blob List (FBL) used by the 2D gel spot segmenter.
 class Sg2fnd
          Class Sg2fnd finds the next spot for the 2D Gel Spot segmenter using a 4-neighbor definition of a spot.
 class Sg2hash
          Class Sg2hash specifies the picture hash table used by the 2D gel spot segmenter.
 class Sg2ini
          Class sg2ini initializes data structures for the 2D Gel Spot Segmenter
 class Sg2ngh
          Class Sg2ngh gets neighborhhod data and gaussian filter neighborhood data for 3x3, 5x5, 7x7, 13x13(17) size neighbohhoods.
 class Sg2notch
          Class Sg2notch performs a spot boundary notch analysis for the 2D gel segmenter.
 class Sg2rest
          Class Sg2rest computes the remainder or the Rest-of-image = (Original - segmented) used by the 2D Gel Spot Segmenter.
 class Sg2sat
          Class Sg2sat is used to propagate CC's for saturated average gray value pixels used by the 2D gel spot segmenter.
 class Sg2split
          Class sg2split splits large saturated or near saturated spots by Boundary, Run-Projection-Map (RLM boundary) or Threshold for the 2D gel segmenter.
 class Sg2wrk
          Class Sg2wrk specifies WorkingStack used by the 2D gel segmenter in blob finding.