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| Uses of Sg2glb in Seg2Dgel |
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| Subclasses of Sg2glb in Seg2Dgel | |
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Seg2Dgel
The Seg2Dgel program is a 2D gel spot segmenter for the Open2Dprot project. |
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Sg2avg
Class sg2avg computes pixel neighborhood average for the 2D Gel Spot Segmenter. |
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Sg2bkg
Class Sg2bkg computes background density of the input gel image for the 2D gel spot segmenter. |
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Sg2cc
Class Sg2cc computes the pixel neighborhood central core (CC) for the 2D Gel Spot Segmenter from the averaged image (pix4). |
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Sg2data
Class sg2data splits large saturated or near saturated spots by Boundary, Run-Projection-Map (boundary) or Threshold methods for the 2D gel spot segmenter. |
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Sg2dbug
Class Sg2dbug contains debug print methods for image neighbohood, windows, etc. |
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Sg2draw
Class Sg2draw is used to draw overlay text, dots, plus and boundarys in segmented output images used by the Seg2Dgel. |
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Sg2fbl
Class Sg2fbl specifies methods for manipulating the Final Blob List (FBL) used by the 2D gel spot segmenter. |
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Sg2fnd
Class Sg2fnd finds the next spot for the 2D Gel Spot segmenter using a 4-neighbor definition of a spot. |
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Sg2hash
Class Sg2hash specifies the picture hash table used by the 2D gel spot segmenter. |
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Sg2ini
Class sg2ini initializes data structures for the 2D Gel Spot Segmenter |
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Sg2ngh
Class Sg2ngh gets neighborhhod data and gaussian filter neighborhood data for 3x3, 5x5, 7x7, 13x13(17) size neighbohhoods. |
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Sg2notch
Class Sg2notch performs a spot boundary notch analysis for the 2D gel segmenter. |
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Sg2rest
Class Sg2rest computes the remainder or the Rest-of-image = (Original - segmented) used by the 2D Gel Spot Segmenter. |
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Sg2sat
Class Sg2sat is used to propagate CC's for saturated average gray value pixels used by the 2D gel spot segmenter. |
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Sg2split
Class sg2split splits large saturated or near saturated spots by Boundary, Run-Projection-Map (RLM boundary) or Threshold for the 2D gel segmenter. |
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Sg2wrk
Class Sg2wrk specifies WorkingStack used by the 2D gel segmenter in blob finding. |
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