||The Seg2Dgel program is a 2D gel spot segmenter for the Open2Dprot project.
||Class sg2avg computes pixel neighborhood average for the 2D
Gel Spot Segmenter.
||Class Sg2bkg computes background density of the input
gel image for the 2D gel spot segmenter.
||Class Sg2cc computes the pixel neighborhood central core (CC)
for the 2D Gel Spot Segmenter from the averaged image (pix4).
||Class sg2data splits large saturated or near saturated spots
by Boundary, Run-Projection-Map (boundary) or Threshold methods for the
2D gel spot segmenter.
||Class Sg2dbug contains debug print methods for image neighbohood,
||Class Sg2draw is used to draw overlay text, dots, plus and
boundarys in segmented output images used by the Seg2Dgel.
||Class Sg2drawHistogram is used to draw an image intensity histogram
||Class Sg2fbl specifies methods for manipulating the
Final Blob List (FBL) used by the 2D gel spot segmenter.
||Class Sg2fnd finds the next spot for the 2D Gel Spot
segmenter using a 4-neighbor definition of a spot.
||Class Sg2glb is the base class that specifies global variables
used by all of the other Seg2Dgel 2D gel segmenter classes.
||Class Sg2hash specifies the picture hash table used by the
2D gel spot segmenter.
||Class sg2ini initializes data structures for the
2D Gel Spot Segmenter
||Class Sg2ngh gets neighborhhod data and gaussian filter
neighborhood data for 3x3, 5x5, 7x7, 13x13(17) size neighbohhoods.
||Class Sg2notch performs a spot boundary notch analysis
for the 2D gel segmenter.
||Class Sg2reportPopup creates and displays scrollable string
text area in a popup window.
||Class Sg2rest computes the remainder or the
Rest-of-image = (Original - segmented) used by the 2D Gel Spot Segmenter.
||Class Sg2sat is used to propagate CC's for saturated
average gray value pixels used by the 2D gel spot segmenter.
||Class Sg2showImage implements a popup GUI to show images
used in the 2D Gel Spot Segmenter.
||Class sg2split splits large saturated or near saturated
spots by Boundary, Run-Projection-Map (RLM boundary) or Threshold for
the 2D gel segmenter.
||Class Sg2viewImage implements a popup GUI to show images
used in the 2D Gel Spot Segmenter and an associated histogram GUI.
||Class Sg2wrk specifies WorkingStack used by the 2D gel segmenter
in blob finding.