| Welcome To Accession |
Note: This pre-alpha level software is under construction and will change. Not all functionality described is fully implemented or fully debugged. This documentation will undergo revision as the program develops. |
Introduction
Accession is a
Open2Dprot project Java program to accession sample information
into the system for the Composite
Sample Database (CSD). The CSD consists of protein expression per
(spot) for N samples may be constructred from N sample spot
lists. The Accession program aids in the construction of a database
describing the sample information, region of interest and grayscale
calibration (if applicable for the samples being used).
Accession is a step [1] module in pipeline analysis for the Open2Dprot project.
You can download the Accession program and install it on your computer. Currently, Accession is hardwired to start with the demo samples and with the -gui switch. However, you can add your own samples to the accession database. This initial default will change as the program stabilizes. The remainder of this home page contains links to some screen shots of the interactive GUI. The Web site contains some initial (rudimentary) documentation.
See the Reference Manual for details. You read about downloading and installing the program on your computer. The source code will be put onto open2dprot.sourceforge.net when it is a bit more stable - currently it undergoing major refactoring. Currently, code is available from the CVS server at Open2Dprot at SourceForge.
Please contact us with
suggestions and comments. If you make interesting changes in the
source code, please send us a copy and describe your changes so we can
merge them in the released version.
Examples - samples of screen shots
To give the flavor of running the Accession program, we provide a few
screen shots of the graphical user interfaces and some results. You
can these images in the list below or
view all of the screen shots in a single Web page.
| Contact us | Accession is a contributed program available at
Open2Dprot.sourceforge.net/Accession
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Revised: 10/04/2005 |
