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| Packages that use DbPspot | |
|---|---|
| O2Plib.db | |
| O2Plib.db.CSD | |
| Uses of DbPspot in O2Plib.db |
|---|
| Fields in O2Plib.db declared as DbPspot | |
|---|---|
DbPspot |
DbSample.firstSpotPair
first spot allocated in the linked spotPairList[] spot-pair list. |
DbPspot |
DbSample.lastSpotPair
last spot allocated in the spotPairList[] spot-pair list (optional) |
DbPspot |
DbSample.listPairG
point to first spot of full spot list - initialized to nulls. |
DbPspot[] |
DbSample.spotPairList
DbPspot list [0:nTopSpotPair-1] for DbPspot spots entered by CC #. |
private DbPspot |
DbPairSamples.SpfContentHandler.ss
instance of current Sample DbPspot which is a DbSpot that is extended to encode both spots data in the spot-pair. |
| Methods in O2Plib.db that return DbPspot | |
|---|---|
DbPspot |
DbPspot.clonePspot()
clonePspot() - clone spot sp into this spot. |
DbPspot |
DbPspot.clonePspotRsample()
clonePspotRsample() - clone spot sp into this spot. |
DbPspot |
DbSample.findSpotPairByXY(int nSample,
int xT,
int yT,
int distThr,
boolean allSpotsFlag)
findSpotPairByXY() - find a spot in the spot-pair list that is within distThr of the (x,y) coordinate specified. |
| Methods in O2Plib.db with parameters of type DbPspot | |
|---|---|
boolean |
DbPspot.copySpotValues(DbPspot sp,
boolean copyPointersFlag)
copySpotValues() - copy values in spot sp into this spot. |
boolean |
DbSample.insertSpotPair(DbPspot r,
DbPspot sp)
insertSpotPair() - insert DbPspot r BEFORE sp and update spotPairList[0:nTopSpotPair-1]. |
boolean |
DbPairSamples.pushSpotPair(DbPspot sS)
pushSpotPair() - push DbPspot spots pair of into spotLists and adjust spot pairing data. |
boolean |
DbSample.pushSpotPair(DbPspot r)
pushSpotPair() - push DbPspot spot-pair into spotPairList[0:nTopSpotPair-1]. |
boolean |
DbSample.removeSpotPair(DbPspot r)
removeSpotPair() - remove DbPspot from spotPairList[0:nTopSpotPair-1]. |
| Uses of DbPspot in O2Plib.db.CSD |
|---|
| Fields in O2Plib.db.CSD declared as DbPspot | |
|---|---|
DbPspot |
CSDRspot.rSamplePspot
The DbSpot for the Rsample Rspot. |
DbPspot[] |
CSDRspot.spotList
List of DbPspots constituting the Rspot set [0:nSpots-1]. |
| Methods in O2Plib.db.CSD that return DbPspot | |
|---|---|
DbPspot |
CSDRspot.lookupBestDbPspotBySampleIdx(int idxSample)
lookupBestDbPspotBySampleIdx() - find best DbPspot from Rspot set by sample index. |
| Methods in O2Plib.db.CSD with parameters of type DbPspot | |
|---|---|
boolean |
CSDRspot.add(DbPspot ps)
add() - add DbPspot to the Rspot set spotList[] list if the pairing code is SP, PP, AP, or (US with (xRmom,yRmom) NEQ 0). |
boolean |
CSDRspot.add2ERspot(DbPspot ps)
add2ERspot() - add DbPspot to ERspot set. |
boolean |
CSDlimits.chkPspotLimits(DbPspot pSpot)
chkPspotLimits() - check a DbPspot's Sample values for MW, pIe, (or RT, MZ) area, density (D'), density range, dP and dL limits. |
boolean |
CSDlms.isLandmarkSpot(DbPspot ps)
isLandmarkSpot() - test if sample's ccNbr spot is a landmark spot. |
boolean |
CSDRspot.remove(DbPspot ps)
remove() - remove DbPspot from Rspot set. |
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