CmpSpots
Class CmpData

java.lang.Object
  CmpSpots.Cmpglb
      CmpSpots.CmpData

public class CmpData
extends Cmpglb

Class CmpData.java - do SPF data output for the 2D spot pairing program.

This work was produced by Peter Lemkin of the National Cancer Institute, an agency of the United States Government. As a work of the United States Government there is no associated copyright. It is offered as open source software under the Mozilla Public License (version 1.1) subject to the limitations noted in the accompanying LEGAL file. This notice must be included with the code. The Open2Dprot Mozilla and Legal files are available on http://Open2Dprot.sourceforge.net/.

Version:

$Date: 2005/10/20 12:20:34 $ $Revision: 1.13 $

Author:

P. Lemkin, NCI-Frederick, Frederick, MD, 21702

See Also:

Open2Dprot Home

Field Summary

Fields inherited from class CmpSpots.Cmpglb

acc, accDatabaseFile, accFile, accFormatMode, AP, applicationName, argsV, asgn, banner, bannerTitle, baseImageFileNameRsample, baseImageFileNameSample, batchDir, cacheDir, cmpspotsURL, commutativeLMSswitch, CONSOLE_FLAG, CP, cs, data, DATE, dbLM, dbRsample, dbSample, DBUG_ALL_SSF_SPOTS, DBUG_APPEND, DBUG_ASSIGN_CODES, DBUG_ASSIGN_SSF_TO_LMS, DBUG_COMPUTE_RADII, DBUG_CONSOLE, DBUG_DUMP_LM_SET_SPOTS, DBUG_DUMP_PREFACE_EPILOGUE, DBUG_DUMP_SPF, DBUG_FIND_LMS_IN_SSFS, DBUG_FREE_0200000, DBUG_FREE_04000, DBUG_INITIAL_SPOT_PAIRING, DBUG_PRINT_AT, DBUG_PRINT_FULL_NODE_INFO, DBUG_PRINT_LMS_SET_SPOTS, DBUG_PRINT_LMS_SPOT_MAPPING, DBUG_READ_LANDMARKS, DBUG_READ_SSF_DATA, DBUG_SECONDARY_PAIRING, DBUG_SPECIFIC_SPOTS, DBUG_SWITCH_ANALYSIS, DBUG_SWITCHES, dBugBits, dbugBitsHelpStr, dBugLMsetList, debugSwitch, defaultSwitch, demoFileList, demoSwitch, docFileList, dtdSwitch, EP, fileSeparator, fio, fourSqrtPi, GS, ini, inPixFileRsample, inPixFileSample, inputFormatSwitch, isCsamplePrimeSwitch, jarFileList, jarLibrFileList, landmarkDatabaseFile, latchLandmarkSpotSwitch, legalImageFileExtens, LM, LMSETCOLOR, lmsFile, lmsFormatMode, MAX_LM_LATCH_THR, maxLatchDist, nbrAltLMSSwitch, nDbugLMsetList, NEVER, nlmDB, nSwitches, OPTBKGROUND, osName, pair, pair2ndary, paramH, pix, pix1, pix2, pixFileExtn, PP, ppxDir, pra, projDir, projDirSwitch, propertiesFile, propertiesFileSwitch, ps, PUBLISH, rdbmsDir, REVISION, rRoiDbug, rRoiDbugSwitch, RSAMPLE, rsampleName, rsampleSwitch, SAMPLE, sampleName, sampleSwitch, secondaryPairingSwitch, simplePixFileRsample, simplePixFileSample, sort, SP, spfFormatMode, spfFormatSwitch, spfOutputFile, spfOutputPrefaceFile, SPOTBOXCOLOR, sRoiDbug, sRoiDbugSwitch, ssfFileRsample, ssfFileSample, ssfFormatMode, ssfInputEpilogueFileRsample, ssfInputEpilogueFileSample, ssfInputFileRsample, ssfInputFileSample, ssfInputPrefaceFileRsample, ssfInputPrefaceFileSample, startTime, sw, switchOptCBvalue, switchOptData, switchOptValue, thrPPswitch, thrSPswitch, timerSwitch, tmpDir, updateSwitch, US, usageSwitch, USE_DEMO_DATA, useAccFileSwitch, useHistGUISwitch, useLmsFileSwitch, usePercentDensitySwitch, usePopupGUISwitch, userDir, util, VERSION, xmlDir

Constructor Summary

CmpData()
CmpData() - Constructor

Method Summary

void	reset() reset() - reset any resources that must be reset for the next run of the program.

Methods inherited from class CmpSpots.Cmpglb

get2D, get2D, initGlb, resetGlb, set2D

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

CmpData

public CmpData()

CmpData() - Constructor

Method Detail

reset

public void reset()

reset() - reset any resources that must be reset for the next run of the program.