drawOverLays() - paint the scrollable image canvas which includes
the image, optional ROI's, overlay spots, optional histogram
that is repainted in another class.
findBetterAltPairedSpot() - look for better matching landmark
set for the p1 spot with a US or AP label in otherSample such
that the dP for the new pair is better than the current dP.
itemStateChanged() - handle item state changed events
NOTE: need to implement radio groups here since AWT only
implements radio groups for Checkboxes, and CheckboxMenuItems.
itemStateChanged() - handle item state changed events
NOTE: need to implement radio groups here since AWT only
implements radio groups for Checkboxes, and CheckboxMenuItems.
latchLMvalidState() - copy the (x,y) centroids of the best
estimate SSF spots in dbLM.equivLMspotPtr[k][nsample]
to dbLM.xlm[k][nsample] for the validLM[] landmarks that are "OK"
for use as a better landmark centroid estimate.
Project directory that is either userDir, specified
by -projDir:{path}, or extracted from the input file
path it the image is in a "/ppx/" subdirectory.
testLatchLMvalidState() - Test for landmark sets where error
distance between landmarks > maxLatchDist,
setting landmarks outside of the latch threshold to dbLM.validLM[k] "NL".